Main
MULTIPLE-Seq
--- GENES ---
--- ncRNA ---
---- IGR ----
Statistics
is
Normalisation
is
Coverage
- A -
- B -
/
REF
Threshold
>=
A / B
2 fold
Published Data from :
Genome-wide Analysis of Cell type-specific Gene Expression during Spore Formation in Clostridium difficile, PLoS Genetics
List of Sigma target: (85)
SigF (11)
CD630_03470
CD630_07610
CD630_12290
CD630_26860
CD630_28560
SigG (33)
CD630_05430
CD630_06840
CD630_12900
CD630_13540
CD630_14300
CD630_14630
CD630_14860
CD630_15430
CD630_15670
CD630_15680
CD630_17070
CD630_17890
CD630_18800
CD630_21120
CD630_22451
CD630_23750
CD630_24650
CD630_26360
CD630_28080
CD630_28090
CD630_28410
CD630_32201
CD630_34890
CD630_35511
CD630_36100
SigE (47)
CD630_01290
CD630_03110
CD630_03140
CD630_07600
CD630_10630
CD630_12300
CD630_12340
CD630_13190
CD630_14160
CD630_17260
CD630_18840
CD630_19400
CD630_24291
CD630_24430
CD630_24450
CD630_26410
CD630_28000
CD630_28160
CD630_28330
CD630_28640
CD630_28650
CD630_32480
CD630_32510
CD630_32580
CD630_32980
CD630_34550
CD630_34570
CD630_34640
CD630_34830
CD630_34940
CD630_35210
CD630_35220
CD630_35670
CD630_36380
SigK (25)
CD630_01200
CD630_05640
CD630_08960
CD630_09020
CD630_10631
CD630_10632
CD630_10670
CD630_11330
CD630_12300
CD630_18910
CD630_18980
CD630_19270
CD630_21440
CD630_21840
CD630_24090
CD630_24590
CD630_35690
CD630_35800
CD630_36130
SigA (6)
CD630_07610
CD630_10850
CD630_21020
CD630_32200
Spore formation in Clostridium difficile
ID
Type
Begin
End
Strand
Description
Coverage A
Coverage B
Mean A
Mean B
A/B
CD630_01240|spoIID
CDS
169522
170586
+
Stage II sporulation protein D
0 0
0 0 0
0
0
0.00
ZOOM Y ( 1 -
250
)
ZOOM X (
1
x )
CD630_01230|murA
CD630_01240|spoIID
CD630_01250|spoIIQ
STAP
TSS
+
TAP
TSS
+
RNASeq
RNA
TAP
TSS
-
STAP
TSS
-