TEST
ENTER your Analysis (title) :
https
VIEW an Analysis
Condition A
Condition B
Cookies are mandatory to recover Your Data
A1 :
B1 :
-------------------- YOUR Analysis ------------------
A2 :
B2 :
---------------- PUBLISHED Analysis (8) ----------------
2017 - C. difficile R20291: effect of tcdR mutation on sporulation
2017 - P. aeruginosa P4 Infection (Phage & Host)
2016 - C. difficile 630 SNP Influence (CD630 & 630Derm & 630E)
2016 - P. aeruginosa P3 Infection (Phage & Host)
2015 - C. difficile CRISPR system (CD630 & R20291)
2014 - S. typhimurium Expanding the RpoS/sigS-Network
2013 - C. difficile Genome-wide Identification of sRNA
2013 - C. difficile Genome-wide Identification of Sigma Factor
A3 :
B3 :
--------------------- TUTORIAL Data --------------------
Campylobacter jejuni rpoN/WT (RNA)
Sulfolobus solfataricus TSS+ (TSS)
Mixed Sulfolobus solfataricus (MIX)
Unpublished Data A / Ref (DNA)
WorkShop RpoS / WT (RNA)
A4 :
B4 :
Users : 14
/
Analysis : 89
(details)
NORM Factors :
STATISTICS :
-------------------- REMOVE Analysis -------------------
MAP2COV Converter
Graphic Support
Convert mapping data to COV2HTML analysis file
MAP2COV, DNA-, RNA-, ChIP-seq, NORM Factors and Statistics
WINDOWS* (XP, Vista, 7+)
MAP2COV_WIN.zip
MAP2COV
DNA-seq
MAC OS (10.6+)
MAP2COV_MAC.zip
RNA-seq
ChIP-seq
SOURCE Code Files
MAP2COV_SRC.zip
NORM Factors
STATISTICS
*Windows pre-requisite software links:
Python 2.7.3
Pathogenesis of Bacterial Anaerobes
Pubmed
Source
Project
M. Monot
M. Orgeur
E. Camiade
C. Brehier
B. Dupuy
Abstract
SourceForge
Institut Pasteur
The COV2HTML software is composed of 2 parts: MAP2COV to convert to as suitable format alignment of the deep sequencing reads with the reference sequence
and this visualization web interface for the coverage of all Next Generation Sequencing (DNA-seq, RNA-seq, ChIP-seq and Transcription Start Site).