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EXPORT GENES
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RNA-Seq
--- GENES ---
--- ncRNA ---
---- IGR ----
Statistics
is
Normalisation
is
OFF
Coverage
- 24H -
- 6H -
/
REF
Threshold
>=
24H / 6H
2 fold
Published Data from :
What is a SNP between friends: the influence of single nucleotide polymorphisms on Clostridium difficile strain CD630 virulence.
Filtered Genes (380)
CD630_00160|dnaX (1)
CD630_00230|ctsR-CD630_00250|mcsB (3)
CD630_00510|gltX (1)
CD630_00520|cysS-CD630_00530|mrnC (2)
CD630_00630|rplJ-CD630_00650 (3)
CD630_00720|rpsJ-CD630_00990|rplQ (32)
CD630_01060|cwlD (1)
CD630_01200|glmS (1)
CD630_01240|spoIID-CD630_01260|spoIIID (3)
CD630_01310-CD630_01320 (2)
CD630_01420 (1)
CD630_01450-CD630_01460 (2)
CD630_01560 (1)
CD630_01740|cooS (1)
CD630_01910-CD630_01930|groS (3)
CD630_01950 (1)
CD630_02050-CD630_02120 (8)
CD630_02320|flgL (1)
CD630_02340|csrA (1)
CD630_02370|fliD (1)
CD630_02390|fliC (1)
CD630_02450|flgB-CD630_02460|flgC (2)
CD630_02470|fliE-CD630_02490|fliG (3)
CD630_02500|fliH (1)
CD630_02510|fliI-CD630_02550|flgE (5)
CD630_02551|FlbD-CD630_02580|fliL (4)
CD630_02600|fliP-CD630_02690|flgG (11)
CD630_02700|fliM-CD630_02720 (3)
CD630_02740 (1)
CD630_02830 (1)
CD630_02880-CD630_02910 (4)
CD630_03140 (1)
CD630_03320|bclA1 (1)
CD630_03500-CD630_03520 (3)
CD630_03880|bglF-CD630_03900|bglG (3)
CD630_03910|asnB (1)
CD630_04120 (1)
CD630_04230 (1)
CD630_04330-CD630_04341 (3)
CD630_04900 (1)
CD630_04940 (1)
CD630_04970-CD630_04990 (4)
CD630_05000 (1)
CD630_05030 (1)
CD630_05060 (1)
CD630_05103 (1)
CD630_05490 (1)
CD630_05500 (1)
CD630_05530-CD630_05570 (5)
CD630_05600|nfo-CD630_05610 (2)
CD630_05630 (1)
CD630_05650|nth-CD630_05670 (3)
CD630_05710-CD630_05730 (3)
CD630_05800|gapN-CD630_05810 (2)
CD630_05850 (1)
CD630_05900 (1)
CD630_05960-CD630_05980|cotCB (3)
CD630_06390-CD630_06400 (2)
CD630_06550 (1)
CD630_06600|tcdB (1)
CD630_06630|tcdA (1)
CD630_06680-CD630_06690 (2)
CD630_06750 (1)
CD630_07060 (1)
CD630_07110|argS (1)
CD630_07390 (1)
CD630_07490 (1)
CD630_07600 (1)
CD630_07700|spoIIAA-CD630_07720|sigF (3)
CD630_07730|spoVAC-CD630_07760 (4)
CD630_07820 (1)
CD630_07970 (1)
CD630_07990 (1)
CD630_08060 (1)
CD630_08320|aksA-CD630_08340|icd (3)
CD630_08490 (1)
CD630_08790-CD630_08810 (3)
CD630_08930 (1)
CD630_08960 (1)
CD630_09020 (1)
CD630_09420 (1)
CD630_09830 (1)
CD630_09890|leuA-CD630_09920|leuB (4)
CD630_09970 (1)
CD630_10280 (1)
CD630_10380-CD630_10390 (2)
CD630_10450 (1)
CD630_10470|cwp18 (1)
CD630_10500 (1)
CD630_10520 (1)
CD630_10630-CD630_10640|ccpA (5)
CD630_10660 (1)
CD630_10670 (1)
CD630_10850-CD630_10870|zupT (3)
CD630_11250 (1)
CD630_11280|polA-CD630_11290|coaE (2)
CD630_11310 (1)
CD630_11320-CD630_11330 (2)
CD630_11500|minD-CD630_11530|mgsA (4)
CD630_11820|fabG-CD630_11840|fabF (3)
CD630_11910|fbp-CD630_11990|spoIIIAH (9)
CD630_12140|spo0A (1)
CD630_12220 (1)
CD630_12270-CD630_12280 (2)
CD630_12340 (1)
CD630_12590|brnQ-1 (1)
CD630_12610-CD630_12630 (3)
CD630_12790|iscS2-CD630_12800 (2)
CD630_12850 (1)
CD630_12870|fur (1)
CD630_12910|dacF (1)
CD630_12980 (1)
CD630_13040|acd-CD630_13050|dnaF (2)
CD630_13190 (1)
CD630_13540 (1)
CD630_13850-CD630_13870 (3)
CD630_13910 (1)
CD630_14030-CD630_14041 (3)
CD630_14160 (1)
CD630_14290 (1)
CD630_14350-CD630_14360 (2)
CD630_14510|folB (1)
CD630_14700 (1)
CD630_14720 (1)
CD630_14740 (1)
CD630_14790|feoB1-CD630_14800 (2)
CD630_14860 (1)
CD630_14950|proC (1)
CD630_15070 (1)
CD630_15200 (1)
CD630_15210|tyrS (1)
CD630_15240-CD630_15250 (2)
CD630_15650|ilvC-CD630_15680 (4)
CD630_15750 (1)
CD630_15770|pgm (1)
CD630_15810 (1)
CD630_15890 (1)
CD630_15940|cysK-CD630_15950|cysE (2)
CD630_15951 (1)
CD630_16000|thiM-CD630_16010|thiE (2)
CD630_16160 (1)
CD630_16200 (1)
CD630_16230-CD630_16240|vanR (2)
CD630_16430 (1)
CD630_16750 (1)
CD630_16900|trxA-CD630_16910|trxB (2)
CD630_17070 (1)
CD630_17260 (1)
CD630_17292 (1)
CD630_17670|gapB (1)
CD630_17740-CD630_17800 (7)
CD630_17850|argG (1)
CD630_18160|cmk (1)
CD630_18180|ispH (1)
CD630_18220|bcp-CD630_18240 (3)
CD630_18320|aroF-CD630_18400 (9)
CD630_18450-CD630_18460 (2)
CD630_18490 (1)
CD630_18530 (1)
CD630_18560-CD630_18570 (2)
CD630_18580 (1)
CD630_18620 (1)
CD630_18710 (1)
CD630_18750|vexP3 (1)
CD630_18800 (1)
CD630_18840 (1)
CD630_19280-CD630_19290 (2)
CD630_19300 (1)
CD630_19903 (1)
CD630_20270 (1)
CD630_21440 (1)
CD630_22440 (1)
CD630_22510 (1)
CD630_22850 (1)
CD630_23070-CD630_23080 (2)
CD630_23090 (1)
CD630_23730-CD630_23750 (3)
CD630_23861 (1)
CD630_23990-CD630_24010|cotD (3)
CD630_24310 (1)
CD630_24830 (1)
CD630_25410 (1)
CD630_26720|appA-CD630_26740|appC (3)
CD630_28090 (1)
CD630_28140-CD630_28160 (3)
CD630_28450|rbr (1)
CD630_28680 (1)
CD630_29500 (1)
CD630_29520 (1)
CD630_30060 (1)
CD630_30320 (1)
CD630_30420 (1)
CD630_31580 (1)
CD630_32490|sspB (1)
CD630_33120 (1)
CD630_33682 (1)
CD630_34040|cls-CD630_34070 (4)
CD630_36130 (1)
CD630_36540|dnaC (1)
630 SNP Influence
Strain: 630E (24H-6H)
Strain: CD630 (14H-6H)
Strain: CD630 (24H-6H)
Strain: 630Derm (14H-6H)
Strain: 630Derm (24H-6H)
Strain: 630E (14H-6H)
Strand +
Strand -
ID
Type
Begin
End
Strand
Description
Coverage A
Coverage B
Mean A
Mean B
A/B
CD630_00010|dnaA
CDS
1
1320
+
Chromosomal replication initiator protein
317 214
211 174
265
193
1.36
View: pack/full
Full
Pack
ZOOM Y ( 1 -
250
)
ZOOM X (
1
x )
CD630_00010|dnaA
CD630_00020|dnaN
24H
RNA
+
(0.64)
6H
RNA
+
(1.18)