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EXPORT GENES
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RNA-Seq
--- GENES ---
--- ncRNA ---
---- IGR ----
Statistics
is
Normalisation
is
OFF
Coverage
- 14H -
- 6H -
/
REF
Threshold
>=
14H / 6H
2 fold
Published Data from :
What is a SNP between friends: the influence of single nucleotide polymorphisms on Clostridium difficile strain CD630 virulence.
Filtered Genes (270)
CD630_00050|gyrB-CD630_00060|gyrA (2)
CD630_00110|sigB (1)
CD630_00160|dnaX (1)
CD630_00180|recR (1)
CD630_00230|ctsR (1)
CD630_00300 (1)
CD630_00580|tuf1-CD630_00620|rplA (6)
CD630_00630|rplJ-CD630_00640|rplL (2)
CD630_00660|rpoB-CD630_00990|rplQ (38)
CD630_01040|rplM-CD630_01060|cwlD (3)
CD630_01080|nrdD (1)
CD630_01190|glmM (1)
CD630_01200|glmS (1)
CD630_01230|murA-CD630_01260|spoIIID (4)
CD630_01310-CD630_01320 (2)
CD630_01430|secA1-CD630_01460 (4)
CD630_01470 (1)
CD630_01550|hpdA-CD630_01560 (2)
CD630_02050-CD630_02100 (6)
CD630_02160 (1)
CD630_02180|purE (1)
CD630_03070-CD630_03080 (2)
CD630_03240|cbiM (1)
CD630_03320|bclA1 (1)
CD630_03500 (1)
CD630_03880|bglF (1)
CD630_03910|asnB (1)
CD630_04230 (1)
CD630_04340 (1)
CD630_04530-CD630_04532 (2)
CD630_04550 (1)
CD630_05100 (1)
CD630_05110|tndX (1)
CD630_05170 (1)
CD630_05530-CD630_05570 (5)
CD630_05600|nfo-CD630_05610 (2)
CD630_05640-CD630_05650|nth (2)
CD630_05710 (1)
CD630_05730 (1)
CD630_05880 (1)
CD630_06860|rpmI-CD630_06870|rplT (2)
CD630_06900 (1)
CD630_06960 (1)
CD630_06990|pheS-CD630_07000|pheT (2)
CD630_07560 (1)
CD630_07600-CD630_07610 (2)
CD630_07700|spoIIAA-CD630_07720|sigF (3)
CD630_07730|spoVAC-CD630_07750|spoVAE (3)
CD630_08250|rbr-CD630_08290 (5)
CD630_08440|cwp25 (1)
CD630_08960 (1)
CD630_09020 (1)
CD630_09400 (1)
CD630_09570 (1)
CD630_09840 (1)
CD630_09970 (1)
CD630_10220 (1)
CD630_10270|potD (1)
CD630_10300 (1)
CD630_10500 (1)
CD630_10630-CD630_10633 (4)
CD630_10660 (1)
CD630_10670 (1)
CD630_11030 (1)
CD630_11250 (1)
CD630_11280|polA-CD630_11290|coaE (2)
CD630_11310 (1)
CD630_11320-CD630_11330 (2)
CD630_11490|minC-CD630_11530|mgsA (5)
CD630_11630|rpmA (1)
CD630_11770|fapR-CD630_11850 (9)
CD630_11920|spoIIIAA (1)
CD630_11950|spoIIIAD-CD630_11990|spoIIIAH (5)
CD630_12140|spo0A (1)
CD630_12290 (1)
CD630_12340 (1)
CD630_12490 (1)
CD630_12570|rplS-CD630_12580 (2)
CD630_12590|brnQ-1 (1)
CD630_12740|topA (1)
CD630_12790|iscS2-CD630_12800 (2)
CD630_12850 (1)
CD630_12910|dacF (1)
CD630_12980 (1)
CD630_13060 (1)
CD630_13140|truB (1)
CD630_13151-CD630_13160|rpsO (2)
CD630_13190-CD630_13230|tepA (5)
CD630_13540 (1)
CD630_13840 (1)
CD630_14030 (1)
CD630_14160 (1)
CD630_14860 (1)
CD630_15550 (1)
CD630_15650|ilvC-CD630_15680 (4)
CD630_15750 (1)
CD630_15940|cysK (1)
CD630_15951 (1)
CD630_16170 (1)
CD630_16230 (1)
CD630_16570|gcvTPA-CD630_16580|gcvPB (2)
CD630_16890-CD630_16910|trxB (3)
CD630_16930 (1)
CD630_17070 (1)
CD630_17260 (1)
CD630_17292 (1)
CD630_17490-CD630_17500 (2)
CD630_17780-CD630_17790 (2)
CD630_18220|bcp-CD630_18230 (2)
CD630_18280|ftsH1 (1)
CD630_18320|aroF-CD630_18330|aroB (2)
CD630_18350|aroC (1)
CD630_18370|aroE1 (1)
CD630_18390|tyrC (1)
CD630_18450 (1)
CD630_18470 (1)
CD630_18750|vexP3 (1)
CD630_18800 (1)
CD630_18840 (1)
CD630_19290 (1)
CD630_19300 (1)
CD630_19902|cspC (1)
CD630_21160|bipA (1)
CD630_21200 (1)
CD630_21520 (1)
CD630_22510 (1)
CD630_23070-CD630_23080 (2)
CD630_23100|cspD-CD630_23110 (2)
CD630_23740-CD630_23750 (2)
CD630_24000|cotJB2-CD630_24010|cotD (2)
CD630_24040 (1)
CD630_24310 (1)
CD630_24730|rpsT (1)
CD630_24980|dacF (1)
CD630_25410 (1)
CD630_25621|rpmB (1)
CD630_26620 (1)
CD630_26720|appA (1)
CD630_26740|appC (1)
CD630_28160 (1)
CD630_28450|rbr (1)
CD630_30320 (1)
CD630_30420 (1)
CD630_30730 (1)
CD630_30910|treA (1)
CD630_32490|sspB (1)
CD630_33300 (1)
CD630_35180|murC (1)
CD630_36130 (1)
CD630_36540|dnaC (1)
630 SNP Influence
Strain: 630E (14H-6H)
Strain: CD630 (14H-6H)
Strain: CD630 (24H-6H)
Strain: 630Derm (14H-6H)
Strain: 630Derm (24H-6H)
Strain: 630E (24H-6H)
Strand +
Strand -
ID
Type
Begin
End
Strand
Description
Coverage A
Coverage B
Mean A
Mean B
A/B
CD630_00010|dnaA
CDS
1
1320
+
Chromosomal replication initiator protein
41 11
86 71
26
78
0.41
View: pack/full
Full
Pack
ZOOM Y ( 1 -
250
)
ZOOM X (
1
x )
CD630_00010|dnaA
CD630_00020|dnaN
14H
RNA
+
(0.15)
6H
RNA
+
(1.80)