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RNA-Seq
--- GENES ---
--- ncRNA ---
---- IGR ----
Statistics
is
Normalisation
is
OFF
Coverage
- 24H -
- 6H -
/
REF
Threshold
>=
24H / 6H
2 fold
Published Data from :
What is a SNP between friends: the influence of single nucleotide polymorphisms on Clostridium difficile strain CD630 virulence.
Filtered Genes (258)
CD630_00110|sigB (1)
CD630_00210|pycA (1)
CD630_00480|ispF (1)
CD630_00490|proS-CD630_00510|gltX (3)
CD630_01060|cwlD (1)
CD630_01250|spoIIQ-CD630_01260|spoIIID (2)
CD630_01310-CD630_01320 (2)
CD630_01400 (1)
CD630_01470 (1)
CD630_01910 (1)
CD630_02050-CD630_02120 (8)
CD630_02260 (1)
CD630_02270 (1)
CD630_02290|flgM-CD630_02320|flgL (4)
CD630_02340|csrA-CD630_02400 (7)
CD630_02450|flgB-CD630_02460|flgC (2)
CD630_02470|fliE-CD630_02490|fliG (3)
CD630_02500|fliH (1)
CD630_02510|fliI-CD630_02550|flgE (5)
CD630_02551|FlbD-CD630_02660|fliA (12)
CD630_02671-CD630_02690|flgG (3)
CD630_02700|fliM-CD630_02710|fliN (2)
CD630_02790 (1)
CD630_03010|rbsA (1)
CD630_03140 (1)
CD630_03320|bclA1 (1)
CD630_03470-CD630_03500 (2)
CD630_03520 (1)
CD630_03890|bglA-CD630_03900|bglG (2)
CD630_04130 (1)
CD630_04400|cwp27 (1)
CD630_04900-CD630_04920 (3)
CD630_04940-CD630_04960 (2)
CD630_05020 (1)
CD630_05130 (1)
CD630_05430 (1)
CD630_05490 (1)
CD630_05710-CD630_05720 (2)
CD630_05800|gapN (1)
CD630_05870-CD630_05900 (4)
CD630_06440 (1)
CD630_06460 (1)
CD630_06600|tcdB (1)
CD630_06630|tcdA (1)
CD630_06830 (1)
CD630_07060 (1)
CD630_07090|mutS2-CD630_07110|argS (3)
CD630_07130-CD630_07140 (2)
CD630_07390 (1)
CD630_07600 (1)
CD630_07730|spoVAC-CD630_07750|spoVAE (3)
CD630_07780 (1)
CD630_07840-CD630_07850 (2)
CD630_07970-CD630_07990 (3)
CD630_08060 (1)
CD630_08180 (1)
CD630_08210 (1)
CD630_08320|aksA-CD630_08350 (4)
CD630_08490 (1)
CD630_08830|glgD (1)
CD630_08930 (1)
CD630_08960 (1)
CD630_09020 (1)
CD630_09400 (1)
CD630_09420 (1)
CD630_09940-CD630_09950|serA (2)
CD630_10000 (1)
CD630_10280 (1)
CD630_10380-CD630_10410|addA (4)
CD630_10470|cwp18 (1)
CD630_10630-CD630_10633 (4)
CD630_10660 (1)
CD630_10670 (1)
CD630_11330 (1)
CD630_11360 (1)
CD630_11920|spoIIIAA-CD630_11990|spoIIIAH (8)
CD630_12270-CD630_12280 (2)
CD630_12340 (1)
CD630_12590|brnQ-1 (1)
CD630_12610 (1)
CD630_12740|topA (1)
CD630_12910|dacF (1)
CD630_12980 (1)
CD630_13011 (1)
CD630_13190 (1)
CD630_13540 (1)
CD630_13840-CD630_13870 (4)
CD630_13910 (1)
CD630_14160 (1)
CD630_14230 (1)
CD630_14350 (1)
CD630_14630 (1)
CD630_14700 (1)
CD630_14790|feoB1 (1)
CD630_14860 (1)
CD630_14940-CD630_14950|proC (2)
CD630_15210|tyrS (1)
CD630_15430 (1)
CD630_15670 (1)
CD630_15750 (1)
CD630_15810 (1)
CD630_15940|cysK-CD630_15950|cysE (2)
CD630_15951 (1)
CD630_16280|vanTG (1)
CD630_16550 (1)
CD630_16690 (1)
CD630_16750 (1)
CD630_16830 (1)
CD630_16870 (1)
CD630_17010|recQ (1)
CD630_17020|thiC (1)
CD630_17070 (1)
CD630_17260 (1)
CD630_17370 (1)
CD630_17470|add-CD630_17490 (3)
CD630_17590 (1)
CD630_17680 (1)
CD630_17740 (1)
CD630_17770 (1)
CD630_17790 (1)
CD630_17860 (1)
CD630_18060|scrK (1)
CD630_18320|aroF (1)
CD630_18460 (1)
CD630_18500 (1)
CD630_18740|vexP2 (1)
CD630_18800 (1)
CD630_18840 (1)
CD630_19100|eutV (1)
CD630_19280-CD630_19290 (2)
CD630_19300 (1)
CD630_19530 (1)
CD630_21530 (1)
CD630_21640|ldh (1)
CD630_22140|SinR (1)
CD630_22440 (1)
CD630_22510 (1)
CD630_23150 (1)
CD630_23730-CD630_23750 (3)
CD630_23861 (1)
CD630_23990-CD630_24010|cotD (3)
CD630_24040 (1)
CD630_24310 (1)
CD630_24910|pmi (1)
CD630_24980|dacF (1)
CD630_25060|LinCd (1)
CD630_25410 (1)
CD630_26620 (1)
CD630_28090 (1)
CD630_28140 (1)
CD630_28280 (1)
CD630_28450|rbr (1)
CD630_28680 (1)
CD630_29250 (1)
CD630_30060 (1)
CD630_30320 (1)
CD630_30420 (1)
CD630_30900|treR (1)
CD630_32240|asd (1)
CD630_32490|sspB (1)
CD630_33120 (1)
CD630_33300 (1)
CD630_33320 (1)
CD630_33682-CD630_33690 (2)
CD630_34040|cls-CD630_34070 (4)
CD630_36130 (1)
630 SNP Influence
Strain: 630Derm (24H-6H)
Strain: CD630 (14H-6H)
Strain: CD630 (24H-6H)
Strain: 630Derm (14H-6H)
Strain: 630E (14H-6H)
Strain: 630E (24H-6H)
Strand +
Strand -
ID
Type
Begin
End
Strand
Description
Coverage A
Coverage B
Mean A
Mean B
A/B
CD630_00010|dnaA
CDS
1
1320
+
Chromosomal replication initiator protein
238 314
17 177
276
97
2.21
View: pack/full
Full
Pack
ZOOM Y ( 1 -
250
)
ZOOM X (
1
x )
CD630_00010|dnaA
CD630_00020|dnaN
24H
RNA
+
(1.07)
6H
RNA
+
(0.30)