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RNA-Seq
--- GENES ---
--- ncRNA ---
---- IGR ----
Statistics
is
Normalisation
is
OFF
Coverage
- 14H -
- 6H -
/
REF
Threshold
>=
14H / 6H
2 fold
Published Data from :
What is a SNP between friends: the influence of single nucleotide polymorphisms on Clostridium difficile strain CD630 virulence.
Filtered Genes (181)
CD630_00620|rplA (1)
CD630_00630|rplJ-CD630_00640|rplL (2)
CD630_00680|rpsL-CD630_00700|fusA (3)
CD630_00720|rpsJ-CD630_00740|rplD (3)
CD630_00760|rplB-CD630_00941|rpmJ (23)
CD630_00960|rpsK-CD630_00990|rplQ (4)
CD630_01060|cwlD (1)
CD630_01240|spoIID (1)
CD630_01260|spoIIID (1)
CD630_01310-CD630_01320 (2)
CD630_01470 (1)
CD630_01720 (1)
CD630_01880 (1)
CD630_02040-CD630_02110|licC (8)
CD630_02160 (1)
CD630_02450|flgB (1)
CD630_02680|flgG1 (1)
CD630_02700|fliM (1)
CD630_02980|rbsR-CD630_03040 (7)
CD630_03140 (1)
CD630_03240|cbiM-CD630_03270|cbiO (4)
CD630_03320|bclA1 (1)
CD630_05560-CD630_05570 (2)
CD630_06420 (1)
CD630_06880 (1)
CD630_07350-CD630_07360 (2)
CD630_07470 (1)
CD630_07600-CD630_07610 (2)
CD630_07730|spoVAC-CD630_07750|spoVAE (3)
CD630_08100 (1)
CD630_08250|rbr-CD630_08290 (5)
CD630_08650 (1)
CD630_08930 (1)
CD630_09020 (1)
CD630_09570-CD630_09580 (2)
CD630_09820|ubiA (1)
CD630_10220 (1)
CD630_10280 (1)
CD630_10300-CD630_10310 (2)
CD630_10631-CD630_10633 (3)
CD630_10670 (1)
CD630_10860 (1)
CD630_11241 (1)
CD630_11330 (1)
CD630_11650 (1)
CD630_11820|fabG-CD630_11840|fabF (3)
CD630_11930|spoIIIAB-CD630_11990|spoIIIAH (7)
CD630_12290 (1)
CD630_12330|cwp26 (1)
CD630_12340 (1)
CD630_12590|brnQ-1 (1)
CD630_12730 (1)
CD630_12910|dacF (1)
CD630_12980 (1)
CD630_13190 (1)
CD630_13540 (1)
CD630_14780|feoA-CD630_14790|feoB1 (2)
CD630_14860 (1)
CD630_14950|proC (1)
CD630_15670 (1)
CD630_15750 (1)
CD630_15810 (1)
CD630_15840 (1)
CD630_15870 (1)
CD630_15900 (1)
CD630_15951 (1)
CD630_16820|iunH (1)
CD630_16840 (1)
CD630_16920-CD630_16930 (2)
CD630_17070 (1)
CD630_17260 (1)
CD630_17710 (1)
CD630_17770 (1)
CD630_18480-CD630_18490 (2)
CD630_18510-CD630_18530 (3)
CD630_18550-CD630_18570 (3)
CD630_18580 (1)
CD630_18800 (1)
CD630_18840 (1)
CD630_19280-CD630_19290 (2)
CD630_19300 (1)
CD630_21200 (1)
CD630_23070-CD630_23080 (2)
CD630_23730-CD630_23750 (3)
CD630_23990-CD630_24010|cotD (3)
CD630_24310 (1)
CD630_25150-CD630_25160|ansB (2)
CD630_25410 (1)
CD630_25920|fbpA (1)
CD630_26130 (1)
CD630_26730|appB (1)
CD630_28450|rbr (1)
CD630_28680 (1)
CD630_29960 (1)
CD630_30320 (1)
CD630_30910|treA (1)
CD630_32230|dapA2 (1)
CD630_32490|sspB (1)
CD630_32990 (1)
630 SNP Influence
Strain: 630Derm (14H-6H)
Strain: CD630 (14H-6H)
Strain: CD630 (24H-6H)
Strain: 630Derm (24H-6H)
Strain: 630E (14H-6H)
Strain: 630E (24H-6H)
Strand +
Strand -
ID
Type
Begin
End
Strand
Description
Coverage A
Coverage B
Mean A
Mean B
A/B
CD630_00010|dnaA
CDS
1
1320
+
Chromosomal replication initiator protein
79 63
16 151
71
84
0.86
View: pack/full
Full
Pack
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250
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ZOOM X (
1
x )
CD630_00010|dnaA
CD630_00020|dnaN
14H
RNA
+
(0.88)
6H
RNA
+
(0.27)