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EXPORT GENES
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RNA-Seq
--- GENES ---
--- ncRNA ---
---- IGR ----
Statistics
is
Normalisation
is
OFF
Coverage
- 24H -
- 6H -
/
REF
Threshold
>=
24H / 6H
2 fold
Published Data from :
What is a SNP between friends: the influence of single nucleotide polymorphisms on Clostridium difficile strain CD630 virulence.
Filtered Genes (226)
CD630_00230|ctsR-CD630_00250|mcsB (3)
CD630_01610-CD630_01620 (2)
CD630_01990 (1)
CD630_02050-CD630_02120 (8)
CD630_02260 (1)
CD630_02270-CD630_02400 (14)
CD630_02410-CD630_02440 (4)
CD630_02450|flgB-CD630_02460|flgC (2)
CD630_02470|fliE-CD630_02490|fliG (3)
CD630_02500|fliH (1)
CD630_02510|fliI-CD630_02550|flgE (5)
CD630_02551|FlbD-CD630_02690|flgG (16)
CD630_02700|fliM-CD630_02720 (3)
CD630_02790 (1)
CD630_02920 (1)
CD630_02980|rbsR (1)
CD630_03020|rbsC-CD630_03030|argE (2)
CD630_03050-CD630_03060 (2)
CD630_03240|cbiM-CD630_03270|cbiO (4)
CD630_03440 (1)
CD630_03880|bglF-CD630_03890|bglA (2)
CD630_03910|asnB (1)
CD630_04351 (1)
CD630_04400|cwp27 (1)
CD630_04930 (1)
CD630_04960-CD630_04990 (5)
CD630_05000 (1)
CD630_05020-CD630_05030 (2)
CD630_05060 (1)
CD630_05100-CD630_05103 (3)
CD630_05490 (1)
CD630_05630 (1)
CD630_05650|nth-CD630_05670 (3)
CD630_05800|gapN (1)
CD630_05960-CD630_05980|cotCB (3)
CD630_06250-CD630_06270 (3)
CD630_06450-CD630_06460 (2)
CD630_06490-CD630_06500 (2)
CD630_06630|tcdA (1)
CD630_07300-CD630_07330 (4)
CD630_07660|srlEb (1)
CD630_07860 (1)
CD630_07990 (1)
CD630_08300 (1)
CD630_08540|oppC-CD630_08550|oppA (2)
CD630_09200 (1)
CD630_09380 (1)
CD630_10290-CD630_10310 (3)
CD630_10330|mnaA (1)
CD630_10360|cwp17 (1)
CD630_10390 (1)
CD630_10500 (1)
CD630_10520 (1)
CD630_10540|bcd2-CD630_10570|crt2 (4)
CD630_10850-CD630_10860 (2)
CD630_11560 (1)
CD630_12130|spoIVB (1)
CD630_12270-CD630_12290 (3)
CD630_12610-CD630_12620|rnhB (2)
CD630_12720 (1)
CD630_12760-CD630_12770 (2)
CD630_13190 (1)
CD630_13630-CD630_13650 (3)
CD630_13740 (1)
CD630_14810 (1)
CD630_14840|ssuA (1)
CD630_14860 (1)
CD630_15230 (1)
CD630_15470|hisZ-CD630_15540|hisI (8)
CD630_15600-CD630_15620 (3)
CD630_15770|pgm (1)
CD630_15800|hom2-CD630_15810 (2)
CD630_15850 (1)
CD630_16250|vanS (1)
CD630_16450-CD630_16460 (2)
CD630_17160-CD630_17170 (2)
CD630_17292 (1)
CD630_17340 (1)
CD630_17370 (1)
CD630_17600 (1)
CD630_17640-CD630_17650 (2)
CD630_17730 (1)
CD630_17780 (1)
CD630_18320|aroF (1)
CD630_18400 (1)
CD630_19070|eutG (1)
CD630_19080|eutS-CD630_19090|eutP (2)
CD630_19120|eutA-CD630_19250|eutQ (14)
CD630_19300 (1)
CD630_19903 (1)
CD630_21180|thrC (1)
CD630_21530-CD630_21570 (5)
CD630_21640|ldh (1)
CD630_22850 (1)
CD630_23090 (1)
CD630_23861-CD630_23870 (2)
CD630_24040 (1)
CD630_25020 (1)
CD630_26720|appA (1)
CD630_26740|appC (1)
CD630_28140 (1)
CD630_28700|kdgT1 (1)
CD630_28790 (1)
CD630_30420 (1)
CD630_30910|treA (1)
CD630_33682 (1)
CD630_34040|cls (1)
630 SNP Influence
Strain: CD630 (24H-6H)
Strain: CD630 (14H-6H)
Strain: 630Derm (14H-6H)
Strain: 630Derm (24H-6H)
Strain: 630E (14H-6H)
Strain: 630E (24H-6H)
Strand +
Strand -
ID
Type
Begin
End
Strand
Description
Coverage A
Coverage B
Mean A
Mean B
A/B
CD630_00010|dnaA
CDS
1
1320
+
Chromosomal replication initiator protein
1000 864
864 631
932
748
1.22
View: pack/full
Full
Pack
ZOOM Y ( 1 -
250
)
ZOOM X (
1
x )
CD630_00010|dnaA
CD630_00020|dnaN
24H
RNA
+
(0.90)
6H
RNA
+
(0.74)